This is a demonstration environment. It may contain non-accurate test data and should not be used for real-world applications. Data will be deleted regularly.

LOC_001JEWP.1

Romania/LOC_001JEWP.1/2025-01-01
S. Dinu, F. L. Prioteasa, A. Pintilescu, O. C. Albu, L. I. Popa, R. I. Iordache, M. Condei & M. Oprea

National Military Medical Institute for Research and Development, Molecular Epidemiology for Communicable Diseases Laboratory

Sample details

Collection date
2025
Earliest release date
2026-07-16
Sampling location
Romania (Bucharest)
Isolate name
RO_moR25-107/2025

Data use terms

Data use terms
OPEN
Data use terms URL

INSDC

NCBI release date
2026-07-16
NCBI update date
2026-07-16
INSDC accession

Host

Host

Submission details

Submission ID
PX853356.1
Submitting group
Date submitted
2026-07-17 05:00:31 UTC
Date released
2026-07-17 05:00:34 UTC

Lineage

Lineage
2

Files

Annotations

Alignment and QC

Total SNPs
123
Total deleted nucs
83
Total frame shifts
1
Frame shifts
NS5:591-905(nt:9450-10395)
Length
610 (6.28%)
Variant
True

Nucleotide mutations

Mutations called relative to the NC_009942.1 reference

Substitutions
  • C9453T
  • C9456G
  • T9465C
  • A9477G
  • G9486A
  • G9489A
  • T9492C
  • A9495G
  • A9498G
  • T9501A
  • C9504G
  • C9507T
  • A9516G
  • T9522C
  • C9528T
  • C9531T
  • G9534A
  • C9537A
Deletions
9367-9449
Insertions
N/A

Amino acid substitutions

Substitutions called relative to the NC_009942.1 reference

Substitutions
N/A
Deletions

NS5

NS5:563-590
Insertions
N/A

Report an issue with this sequence or metadata

Create GitHub issue